STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqeCPutative selenium-dependent hydroxylase accessory protein YqeC; COG: NOG06790 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (235 aa)    
Predicted Functional Partners:
EDS74642.1
FAD binding domain in molybdopterin dehydrogenase; KEGG: sai:Saci_2269 2.1e-10 cutB; carbon monoxide dehydrogenase medium chain K03519; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.799
EDS74640.1
KEGG: mta:Moth_1960 2.1e-124 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K00087; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
 0.796
EDS74641.1
2Fe-2S iron-sulfur cluster-binding domain protein; KEGG: mag:amb2019 7.9e-29 4-hydroxybenzoyl-CoA reductase gamma subunit K04107; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.780
EDS74639.1
Hypothetical protein; KEGG: hma:pNG7236 8.8e-14 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG2068 Uncharacterized MobA-related protein.
 
     0.770
EDS74699.1
KEGG: cpf:CPF_2374 3.9e-50 selD; selenide, water dikinase K01008; COG: COG0709 Selenophosphate synthase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.751
EDS74700.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.559
EDS74698.1
Hypothetical protein; KEGG: cpe:CPE1907 0.0030 patA; probable asparate aminotransferase K00821; Psort location: Cytoplasmic, score: 8.87.
       0.472
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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