STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74706.1Macro domain protein; KEGG: bur:Bcep18194_A6181 7.7e-22 Appr-1-p processing enzyme family K00985; COG: COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; Psort location: Cytoplasmic, score: 8.87. (253 aa)    
Predicted Functional Partners:
EDS74705.1
Hypothetical protein; KEGG: hit:NTHI1634 2.3e-14 NAD-dependent deacetylase sirtuin 5 K01463; COG: COG0846 NAD-dependent protein deacetylases, SIR2 family.
  
 0.993
EDS76053.1
Macro domain protein; KEGG: reh:H16_A1552 2.6e-30 predicted phosphatase homolog to the C-terminal domain of histone macroH2A1; COG: COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; Psort location: Cytoplasmic, score: 8.87.
 
    
0.728
EDS76059.1
Putative permease; KEGG: bcz:BCZK0244 4.3e-115 guanine-hypoxanthine permease; xanthine/uracil permease family protein K06901; COG: COG2252 Permeases; Psort location: CytoplasmicMembrane, score: 9.99.
      0.576
EDS74707.1
Hypothetical protein.
       0.566
EDS75346.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 4.5e-136 NADH dehydrogenase K00359; COG: COG0607 Rhodanese-related sulfurtransferase; Psort location: Cytoplasmic, score: 9.65; Belongs to the sulfur carrier protein TusA family.
  
 0.538
EDS74704.1
YbaK/proline--tRNA ligase associated domain protein; KEGG: bli:BL01235 2.9e-08 proS; prolyl-tRNA synthetase K01881; COG: COG2606 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.511
EDS74090.1
Hypothetical protein; KEGG: ftl:FTL_0636 3.2e-09 NADH oxidase K00359; COG: COG0607 Rhodanese-related sulfurtransferase.
  
 0.430
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.