STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74725.1Hypothetical protein; COG: NOG10981 non supervised orthologous group. (249 aa)    
Predicted Functional Partners:
EDS74724.1
HTH domain protein; COG: COG2378 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
     0.748
EDS74726.1
Radical SAM domain protein; KEGG: reh:H16_A0887 2.6e-21 splB1; DNA repair photolyase K01669; COG: COG1533 DNA repair photolyase; Psort location: Cytoplasmic, score: 8.87.
 
     0.629
EDS74697.1
Hypothetical protein; COG: NOG14194 non supervised orthologous group.
  
     0.584
EDS74218.1
Chorismate mutase; KEGG: aae:aq_951 3.3e-53 pheA; chorismate mutase/prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score: 9.98.
     
 0.558
argG
KEGG: lma:LmjF23.0260 2.3e-132 argininosuccinate synthase, putative K01940; COG: COG0137 Argininosuccinate synthase; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.550
EDS76084.1
Acetyltransferase, GNAT family; KEGG: bha:BH0547 3.9e-07 ribosomal-protein (S18)-alanine acetyltransferase K03789; COG: COG0456 Acetyltransferases; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.486
EDS74014.1
LytTr DNA-binding domain protein; KEGG: wbr:WGLp088 0.0013 rne; ribonucleases G and E; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 9.98.
  
     0.471
EDS74223.1
4Fe-4S binding domain protein; KEGG: mka:MK0930 1.7e-05 coenzyme F420-reducing hydrogenase, gamma subunit K00439; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87.
  
     0.458
EDS75302.1
LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score: 8.87.
  
     0.442
EDS75630.1
Hypothetical protein; KEGG: pfa:PF10_0224 0.00032 dynein heavy chain, putative; COG: KOG1075 FOG: Reverse transcriptase.
  
     0.437
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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