STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74733.1Group II intron, maturase-specific domain protein; KEGG: pol:Bpro_5394 1.6e-12 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase. (128 aa)    
Predicted Functional Partners:
EDS75985.1
Hypothetical protein; KEGG: pol:Bpro_5394 2.6e-08 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
  
     0.772
EDS74777.1
Hypothetical protein; KEGG: pol:Bpro_5394 6.6e-48 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
 
      0.624
EDS75715.1
Hypothetical protein; KEGG: pol:Bpro_5394 2.4e-34 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
 
      0.613
EDS75307.1
Hypothetical protein; KEGG: pol:Bpro_5394 1.0e-35 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
 
      0.612
EDS74559.1
Hypothetical protein; KEGG: pol:Bpro_5394 2.0e-46 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
 
      0.612
EDS74735.1
Hypothetical protein; COG: COG3666 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
    0.577
EDS74734.1
IstB-like ATP-binding protein; COG: COG1484 DNA replication protein.
       0.568
EDS75761.1
Hypothetical protein; KEGG: pol:Bpro_5394 1.9e-27 RNA-directed DNA polymerase K00986; COG: COG3344 Retron-type reverse transcriptase; Psort location: Cytoplasmic, score: 8.87.
 
      0.556
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.