STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74738.1Putative TIGR02678 family protein; COG: NOG16830 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.80. (371 aa)    
Predicted Functional Partners:
EDS74737.1
TIGR02680 family protein; KEGG: cal:orf19.6294 3.7e-20 MYO1; class II myosin heavy chain K01553; COG: NOG04768 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.990
EDS74739.1
TIGR02677 family protein; KEGG: fnu:FN0522 0.0032 exonuclease SBCC K03546; COG: NOG04769 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.990
EDS74736.1
Putative TIGR02679 family protein; COG: NOG10831 non supervised orthologous group.
 
     0.952
EDS75506.1
Efflux ABC transporter, permease protein; KEGG: cal:orf19.2410 6.5e-06 IMH1; involved in vesicular transport K01553; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.676
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
   0.676
EDS76081.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
   
   0.609
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
   
   0.609
EDS74318.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
   
   0.609
EDS75190.1
Transcription termination/antitermination factor NusG; COG: COG0250 Transcription antiterminator; Psort location: Cytoplasmic, score: 8.87.
  
     0.456
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.