STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRType I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. (994 aa)    
Predicted Functional Partners:
hsdM
KEGG: spa:M6_Spy1631 5.8e-159 type I restriction-modification system methylation subunit K03427; COG: COG0286 Type I restriction-modification system methyltransferase subunit; Psort location: Cytoplasmic, score: 8.87.
 
 0.992
EDS74782.1
Hypothetical protein; KEGG: stl:stu0711 1.8e-32 hsdM1; type I restriction-modification system methyltransferase subunit K03427; COG: COG0286 Type I restriction-modification system methyltransferase subunit; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.981
EDS74751.1
Type I restriction modification DNA specificity domain protein; KEGG: yps:YPTB0536 1.3e-58 putative type I restriction enzyme, S subunit K01154; COG: COG0732 Restriction endonuclease S subunits.
 
  
 0.970
EDS74752.1
KEGG: blo:BL1783 3.1e-41 hsdS; HsdS specificity protein of type I restriction-modification system K01154; COG: NOG32801 non supervised orthologous group.
  
 0.955
EDS74749.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
 
   
 0.915
EDS75561.1
Hypothetical protein; COG: NOG11764 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.589
EDS75572.1
Hypothetical protein; COG: NOG11764 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.589
EDS76052.1
Helicase C-terminal domain protein; KEGG: ftf:FTF0244 9.9e-180 DNA/RNA helicase K01529; COG: COG3886 Predicted HKD family nuclease; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.554
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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