STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74761.1Hypothetical protein; COG: NOG12915 non supervised orthologous group. (282 aa)    
Predicted Functional Partners:
EDS74762.1
Hypothetical protein; COG: NOG16011 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.729
EDS74763.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.683
EDS74488.1
SH3 domain protein; KEGG: lwe:lwe1534 0.00025 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.87.
   
 
 0.484
EDS74251.1
Hypothetical protein; COG: COG3595 Uncharacterized conserved protein.
   
   0.471
EDS75230.1
LysM domain protein; KEGG: aeh:Mlg_1995 5.1e-06 lytic transglycosylase, catalytic K08307; COG: COG3409 Putative peptidoglycan-binding domain-containing protein.
   
 
 0.463
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.440
gap
KEGG: fth:FTH_1121 5.1e-128 gapA; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; COG: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Psort location: Cytoplasmic, score: 9.98.
  
   0.435
EDS75956.1
Putative membrane protein; KEGG: pae:PA1977 0.0014 sensor protein GLPS; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
   
   0.427
EDS75132.1
Putative membrane protein; KEGG: pto:PTO1028 0.0091 NADH-quinone oxidoreductase chain M K00342; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
   
   0.427
EDS74396.1
Putative membrane protein; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 9.99.
   
   0.427
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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