STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74766.1Hypothetical protein; KEGG: gka:GK0346 1.0e-14 type I restriction-modification system R subunit (endonuclease) K01153; COG: COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; Psort location: Cytoplasmic, score: 8.87. (118 aa)    
Predicted Functional Partners:
EDS74767.1
Hypothetical protein; KEGG: gka:GK0346 2.0e-08 type I restriction-modification system R subunit (endonuclease) K01153; COG: COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
     0.991
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.832
EDS74751.1
Type I restriction modification DNA specificity domain protein; KEGG: yps:YPTB0536 1.3e-58 putative type I restriction enzyme, S subunit K01154; COG: COG0732 Restriction endonuclease S subunits.
  
 
 0.621
EDS74752.1
KEGG: blo:BL1783 3.1e-41 hsdS; HsdS specificity protein of type I restriction-modification system K01154; COG: NOG32801 non supervised orthologous group.
  
 
 0.621
hsdM
KEGG: spa:M6_Spy1631 5.8e-159 type I restriction-modification system methylation subunit K03427; COG: COG0286 Type I restriction-modification system methyltransferase subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.608
EDS74782.1
Hypothetical protein; KEGG: stl:stu0711 1.8e-32 hsdM1; type I restriction-modification system methyltransferase subunit K03427; COG: COG0286 Type I restriction-modification system methyltransferase subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.608
EDS74764.1
Hypothetical protein.
       0.552
EDS74765.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.552
EDS74768.1
Hypothetical protein.
       0.508
EDS74769.1
ThiF family protein; KEGG: cps:CPS_4642 2.2e-08 thiF; adenylyltransferase ThiF K03148; COG: COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
       0.508
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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