STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74547.1Hypothetical protein; KEGG: sbo:SBO_2558 0.0059 putative enzyme; COG: COG1073 Hydrolases of the alpha/beta superfamily. (305 aa)    
Predicted Functional Partners:
EDS74546.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.779
EDS74548.1
SIS domain protein; KEGG: bte:BTH_I1550 4.3e-12 glucokinase/transcriptional regulator, RpiR family, fusion K00845; COG: COG1737 Transcriptional regulators.
 
     0.771
EDS74549.1
Beta-eliminating lyase; KEGG: cac:CAC3420 7.4e-88 low specificity L-threonine aldolase K01620; COG: COG2008 Threonine aldolase.
       0.745
EDS74354.1
Glycosyltransferase, group 1 family protein; KEGG: aae:aq_516 2.2e-10 mtfC; mannosyltransferase C K00743; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
 
 
 0.654
EDS73937.1
Glycosyltransferase, group 1 family protein; KEGG: pub:SAR11_0559 7.0e-15 rfaK; 1,2-N-acetylglucosaminetransferase; COG: COG0438 Glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.75.
   
 
 0.586
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
   
 
 0.575
pfkB
1-phosphofructokinase; KEGG: cno:NT01CX_1725 1.1e-79 1-phosphofructokinase K00882; COG: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Psort location: Cytoplasmic, score: 8.87; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.567
EDS75378.1
Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 1.4e-16 glycosyl transferase, group 1 K00703; COG: COG0438 Glycosyltransferase.
   
 
 0.566
EDS75379.1
Hypothetical protein.
   
 
 0.566
EDS75380.1
Glycosyltransferase, group 1 family protein; KEGG: ctc:CTC02266 1.1e-13 glycosyl transferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.566
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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