STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74565.1Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: bld:BLi02574 8.2e-34 yqiZ; similar to amino acid ABC transporter (ATP-binding protein); RBL04297 K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (209 aa)    
Predicted Functional Partners:
EDS73805.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.976
EDS74564.1
Hypothetical protein; KEGG: crp:CRP_173 0.0050 histidyl-tRNA synthetase K01892; COG: COG4652 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 10.00.
       0.776
EDS74862.1
ABC transporter, ATP-binding protein; KEGG: ssp:SSP0244 8.2e-14 ABC-type polar amino acid transport system ATPase component K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.744
EDS74029.1
ABC transporter, permease protein; KEGG: bja:blr4464 6.7e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.672
EDS75341.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
 0.644
EDS75247.1
KEGG: spr:spr0622 2.1e-28 glnQ; ABC transporter ATP-binding protein - glutamine transport K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
0.636
EDS75248.1
KEGG: lwe:lwe2133 1.3e-31 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.627
EDS73755.1
KEGG: cch:Cag_1883 2.4e-91 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.621
EDS75292.1
ABC transporter, permease protein; KEGG: ret:RHE_PF00254 5.0e-29 glnP, glnQ; glutamine ABC transporter, ATP-binding protein K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
  0.591
EDS75549.1
KEGG: rru:Rru_A0589 5.6e-83 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.570
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.