STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74566.1Hypothetical protein; COG: NOG18757 non supervised orthologous group. (130 aa)    
Predicted Functional Partners:
EDS74567.1
Hypothetical protein; COG: NOG23778 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.857
EDS74568.1
DnaJ domain protein; COG: COG2214 DnaJ-class molecular chaperone; Psort location: Cytoplasmic, score: 9.65.
 
     0.854
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
       0.730
EDS74570.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.503
EDS74564.1
Hypothetical protein; KEGG: crp:CRP_173 0.0050 histidyl-tRNA synthetase K01892; COG: COG4652 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 10.00.
       0.480
EDS74565.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: bld:BLi02574 8.2e-34 yqiZ; similar to amino acid ABC transporter (ATP-binding protein); RBL04297 K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.480
EDS75384.1
Polysaccharide biosynthesis protein; KEGG: crp:CRP_098 0.0096 leucyl-tRNA synthetase K01869; COG: NOG06398 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.447
EDS74356.1
Hypothetical protein; COG: NOG06398 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.431
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.