STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74586.1Flavodoxin-like protein; KEGG: mac:MA0147 1.1e-29 NADPH:quinone reductase; COG: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). (194 aa)    
Predicted Functional Partners:
nspC
KEGG: hpa:HPAG1_0020 2.5e-87 carboxynorspermidine decarboxylase K01618; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 8.87.
    
  0.859
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.859
EDS74056.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 0. lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Psort location: Extracellular, score: 8.07; Belongs to the glycosyl hydrolase 2 family.
    
  0.616
EDS75482.1
Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 1.6e-23 ribonuclease UK114; COG: COG0251 Putative translation initiation inhibitor, yjgF family.
    
 0.604
EDS75031.1
Methyltransferase domain protein; KEGG: bme:BMEI1834 1.4e-40 ubiquinone/menaquinone biosynthesis methyltransferase UbiE K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
     
 0.590
EDS74794.1
Aminotransferase, class I/II; KEGG: bce:BC2896 3.3e-85 aspartate aminotransferase; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.
  
    0.548
EDS74587.1
YheO-like protein; COG: COG2964 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
       0.542
EDS74582.1
Peptidase propeptide and YPEB domain protein; COG: COG3212 Predicted membrane protein.
       0.537
EDS74583.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bca:BCE_2676 8.6e-55 two-component sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.537
EDS74584.1
KEGG: rha:RHA1_ro05622 2.7e-42 response regulator (protein-glutamate methylesterase) K07669; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.537
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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