STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS74591.1KEGG: lwe:lwe1990 2.0e-48 ABC transporter, ATP-binding protein K06020; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (297 aa)    
Predicted Functional Partners:
EDS74590.1
Hypothetical protein; COG: NOG29223 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.976
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.897
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.894
EDS73806.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 7.8e-45 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
0.782
EDS74111.1
ABC transporter, ATP-binding protein; KEGG: pen:PSEEN1283 1.2e-62 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
     
0.768
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
    
0.745
EDS75766.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.585
EDS74030.1
KEGG: efa:EF0246 8.2e-82 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.564
EDS75015.1
KEGG: mcp:MCAP_0202 6.5e-57 spermidine/putrescine ABC transporter, ATP-binding protein K02052; COG: COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
 
    
0.546
EDS74592.1
Aminopeptidase I zinc metalloprotease (M18); KEGG: cac:CAC1091 3.3e-156 aspartyl aminopeptidase K01269; COG: COG1362 Aspartyl aminopeptidase; Psort location: Cytoplasmic, score: 8.87.
   
   0.539
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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