STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74595.1Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: cpf:CPF_0259 2.5e-183 putative beta-N-acetylhexosaminidase K01207; COG: COG1472 Beta-glucosidase-related glycosidases; Belongs to the glycosyl hydrolase 3 family. (904 aa)    
Predicted Functional Partners:
EDS75403.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: cpf:CPF_0259 4.6e-117 putative beta-N-acetylhexosaminidase K01207; COG: COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.908
EDS75163.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpf:CPF_0259 2.6e-117 putative beta-N-acetylhexosaminidase K01207; COG: COG1472 Beta-glucosidase-related glycosidases.
  
  
 
0.905
EDS74594.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: sco:SCO2786 7.0e-109 hexA, SCC105.17c; beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.95.
 
    
0.547
yabP
Sporulation protein YabP; COG: NOG13819 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.498
EDS74598.1
COG: COG2919 Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
       0.421
EDS74597.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.416
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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