STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74599.1KEGG: pfu:PF1108 9.4e-33 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200; COG: COG2819 Predicted hydrolase of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87. (258 aa)    
Predicted Functional Partners:
EDS75949.1
Putative esterase; COG: COG4947 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
     0.787
EDS75950.1
ATP-grasp domain protein; KEGG: cpe:CPE0819 2.0e-05 ddlB; D-alanine-D-alanine ligase K01921; COG: NOG08747 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.773
EDS75948.1
Hypothetical protein; KEGG: aae:aq_742 2.3e-05 purD; phosphoribosylamine-glycine ligase K01945; COG: NOG08747 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.769
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
  
    0.753
EDS74600.1
Cof-like hydrolase; KEGG: btl:BALH_4896 6.8e-30 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.748
EDS74601.1
KEGG: bcz:BCZK5094 4.5e-33 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.748
folC
Bifunctional protein FolC; KEGG: bca:BCE_4548 8.8e-53 folC; folylpolyglutamate synthase K01930; COG: COG0285 Folylpolyglutamate synthase; Psort location: Cytoplasmic, score: 8.87.
       0.748
EDS74604.1
KEGG: bca:BCE_3757 6.4e-34 acetyltransferase, GNAT family, putative K03830; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.731
EDS74605.1
Hypothetical protein.
       0.731
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
  0.564
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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