STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74599.1KEGG: pfu:PF1108 9.4e-33 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200; COG: COG2819 Predicted hydrolase of the alpha/beta superfamily; Psort location: Cytoplasmic, score: 8.87. (258 aa)    
Predicted Functional Partners:
EDS75949.1
Putative esterase; COG: COG4947 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
     0.796
EDS75950.1
ATP-grasp domain protein; KEGG: cpe:CPE0819 2.0e-05 ddlB; D-alanine-D-alanine ligase K01921; COG: NOG08747 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.774
EDS75948.1
Hypothetical protein; KEGG: aae:aq_742 2.3e-05 purD; phosphoribosylamine-glycine ligase K01945; COG: NOG08747 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.770
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
  
    0.752
EDS74600.1
Cof-like hydrolase; KEGG: btl:BALH_4896 6.8e-30 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.747
folC
Bifunctional protein FolC; KEGG: bca:BCE_4548 8.8e-53 folC; folylpolyglutamate synthase K01930; COG: COG0285 Folylpolyglutamate synthase; Psort location: Cytoplasmic, score: 8.87.
       0.747
EDS74601.1
KEGG: bcz:BCZK5094 4.5e-33 hydrolase, haloacid dehalogenase-like family K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.746
EDS74604.1
KEGG: bca:BCE_3757 6.4e-34 acetyltransferase, GNAT family, putative K03830; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.731
EDS74605.1
Hypothetical protein.
       0.731
EDS74598.1
COG: COG2919 Septum formation initiator; Psort location: Cytoplasmic, score: 8.87.
       0.513
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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