STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74606.1Putative spore coat protein GerQ; COG: NOG14257 non supervised orthologous group. (111 aa)    
Predicted Functional Partners:
cwlJ
KEGG: bcz:BCZK2341 4.5e-26 cwlJ; cell wall hydrolase K01449; COG: COG3773 Cell wall hydrolyses involved in spore germination; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.958
cotE
Spore coat protein E; COG: NOG09743 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.886
EDS75788.1
Peptidase, M23 family; KEGG: bas:BUsg310 1.6e-06 yebA; hypothetical 46.7 kD protein in msbB-ruvB; COG: COG0739 Membrane proteins related to metalloendopeptidases.
  
    0.798
EDS75125.1
Small, acid-soluble spore protein, alpha/beta type; COG: NOG16862 non supervised orthologous group; Psort location: Extracellular, score: 8.82.
  
    0.777
EDS75779.1
COG: COG2834 Outer membrane lipoprotein-sorting protein.
  
     0.773
sasPA
Small, acid-soluble spore protein A; COG: NOG16862 non supervised orthologous group; Psort location: Extracellular, score: 8.82.
  
    0.763
EDS75841.1
Putative sporulation protein YunB; COG: NOG11559 non supervised orthologous group.
  
     0.757
EDS75152.1
Polysaccharide biosynthesis protein; KEGG: cac:CAC3205 0.0061 spoIIE; stage II sporulation protein E, serine phosphatase family K06382; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.750
EDS75062.1
Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
     0.737
yabP
Sporulation protein YabP; COG: NOG13819 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.713
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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