STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74627.1K+-dependent Na+/Ca+ exchanger family protein; COG: COG0530 Ca2+/Na+ antiporter; Psort location: CytoplasmicMembrane, score: 9.99. (287 aa)    
Predicted Functional Partners:
EDS74628.1
Glycerophosphodiester phosphodiesterase family protein; KEGG: cac:CAC0430 8.1e-43 glycerophosphoryl diester phosphodiesterase K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 9.98.
     
 0.777
EDS74626.1
Hypothetical protein.
       0.541
EDS73998.1
COG: COG0668 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.538
EDS74864.1
Hypothetical protein; KEGG: twh:TWT315 0.00050 undecaprenyl-diphosphatase K06153; COG: COG2035 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.534
EDS74629.1
Alcohol dehydrogenase, iron-dependent; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.529
EDS75865.1
Hypothetical protein; KEGG: pae:PA0196 0.0018 pntB; pyridine nucleotide transhydrogenase, beta subunit K00325; COG: COG2035 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.439
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.