STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74111.1ABC transporter, ATP-binding protein; KEGG: pen:PSEEN1283 1.2e-62 livG; branched-chain amino acid ABC transporter, ATP-binding protein; COG: COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (254 aa)    
Predicted Functional Partners:
EDS74109.1
KEGG: fal:FRAAL2623 3.7e-29 hypothetical protein; putative membrane protein involved in branched-chain amino acid transport, ATP-binding; COG: COG0559 Branched-chain amino acid ABC-type transport system, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EDS74110.1
KEGG: reh:H16_A3653 3.3e-28 ABC-type transporter, ATPase and permease components; COG: COG4177 ABC-type branched-chain amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EDS74107.1
Receptor family ligand-binding protein; COG: COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.996
EDS74112.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A5826 1.8e-70 ABC branched-chain amino acid family transporter, ATPase subunit K01996; COG: COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
0.993
EDS74591.1
KEGG: lwe:lwe1990 2.0e-48 ABC transporter, ATP-binding protein K06020; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
   
 
0.814
EDS75930.1
KEGG: rha:RHA1_ro06063 9.0e-28 probable ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
   
 
0.697
EDS75828.1
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 3.4e-05 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.525
EDS75671.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bxe:Bxe_A4149 0.0022 cytochrome bd ubiquinol oxidase, subunit II K00426; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
    
  0.446
EDS74645.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
    
  0.446
EDS74108.1
Hypothetical protein.
       0.434
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.