STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74171.1Thiamine transporter protein (Thia_YuaJ); COG: COG3859 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (175 aa)    
Predicted Functional Partners:
EDS74179.1
Ser/Thr phosphatase family protein; KEGG: hso:HS_0581 2.1e-07 icc; 3',5'-cyclic-nucleotide phosphodiesterase K03651; COG: COG1409 Predicted phosphohydrolases.
 
     0.768
EDS75129.1
Putative septation ring formation regulator EzrA; KEGG: fnu:FN0522 3.9e-11 exonuclease SBCC K03546; COG: COG4477 Negative regulator of septation ring formation; Psort location: Cytoplasmic, score: 8.87.
  
     0.739
EDS75281.1
PPIC-type PPIASE domain protein; KEGG: ser:SERP1376 1.1e-19 protein export protein PrsA, putative K01802; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.731
EDS75075.1
Hypothetical protein; COG: COG0457 FOG: TPR repeat; Psort location: Cytoplasmic, score: 8.87.
  
     0.719
EDS74149.1
COG: COG4851 Protein involved in sex pheromone biosynthesis.
  
     0.614
EDS74557.1
KEGG: bsu:BG14132 3.3e-53 cssS, yvqB; two-component sensor histidine kinase. potential cognate response regulator is cssR K07650; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
  
     0.608
EDS74392.1
Hypothetical protein; KEGG: lwe:lwe2040 1.0e-10 cell division protein DivIVA K01549; COG: COG3599 Cell division initiation protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.589
rex
CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
 
     0.582
yeaZ
Universal bacterial protein YeaZ; KEGG: mcp:MCAP_0267 4.8e-22 metalloendopeptidase, putative; COG: COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; Psort location: Cytoplasmic, score: 8.87.
 
     0.572
EDS75754.1
Hypothetical protein; KEGG: ctc:CTC02329 7.7e-10 putative V-type sodium ATP synthase subunit E K02121; COG: NOG31657 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.565
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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