STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74183.1Putative peptidoglycan binding domain protein; KEGG: bcl:ABC2815 3.3e-11 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG3409 Putative peptidoglycan-binding domain-containing protein. (730 aa)    
Predicted Functional Partners:
EDS73902.1
Hypothetical protein; KEGG: cpe:CPE0191 6.3e-08 nagH; hyaluronoglucosaminidase K01197; COG: NOG04032 non supervised orthologous group.
 
  
  0.810
EDS74362.1
Abi-like protein; COG: COG4823 Abortive infection bacteriophage resistance protein.
  
     0.630
EDS75220.1
F5/8 type C domain protein; KEGG: cpe:CPE0191 0. nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Extracellular, score: 9.73.
  
     0.488
EDS75527.1
Putative hyalurononglucosaminidase; KEGG: cpe:CPE0191 0. nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Extracellular, score: 9.73.
  
     0.449
nagH
Hyalurononglucosaminidase; KEGG: cpf:CPF_0184 1.4e-276 nagH; hyaluronidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Extracellular, score: 9.73.
  
     0.443
EDS74945.1
Hypothetical protein; COG: COG1296 Predicted branched-chain amino acid permease (azaleucine resistance).
 
     0.415
pgi
KEGG: bli:BL02591 3.9e-137 pgi; glucose-6-phosphate isomerase K01810; COG: COG0166 Glucose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
    
  0.411
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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