STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74190.1Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87. (320 aa)    
Predicted Functional Partners:
EDS74191.1
Phage integrase SAM-like domain protein; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
 
     0.943
EDS74189.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase.
 
     0.936
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.859
EDS74188.1
Transposase; COG: COG2963 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
       0.560
EDS75138.1
Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87.
  
     0.556
EDS73738.1
Putative transposase, IS4 family; KEGG: fnu:FN0522 0.00026 exonuclease SBCC K03546; COG: COG5421 Transposase; Psort location: Cytoplasmic, score: 8.87.
  
     0.556
EDS75630.1
Hypothetical protein; KEGG: pfa:PF10_0224 0.00032 dynein heavy chain, putative; COG: KOG1075 FOG: Reverse transcriptase.
  
     0.435
EDS74187.1
Integrase core domain protein; KEGG: nwi:Nwi_0782 3.2e-10 integrase, catalytic region K00986; COG: COG2801 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
       0.430
EDS74772.1
Hypothetical protein; COG: COG5421 Transposase.
  
     0.402
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.