STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74221.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (191 aa)    
Predicted Functional Partners:
EDS74222.1
Glycerate kinase; KEGG: sak:SAK_0918 1.7e-106 glycerate kinase K00865; COG: COG1929 Glycerate kinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the glycerate kinase type-1 family.
       0.773
EDS74223.1
4Fe-4S binding domain protein; KEGG: mka:MK0930 1.7e-05 coenzyme F420-reducing hydrogenase, gamma subunit K00439; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS74224.1
COG: COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.773
EDS74225.1
COG: COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.634
EDS74220.1
HAD hydrolase, family IA, variant 1; KEGG: tte:TTE2216 6.8e-23 gph; predicted phosphatase K06019; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.509
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.424
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.