STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74222.1Glycerate kinase; KEGG: sak:SAK_0918 1.7e-106 glycerate kinase K00865; COG: COG1929 Glycerate kinase; Psort location: Cytoplasmic, score: 8.87; Belongs to the glycerate kinase type-1 family. (396 aa)    
Predicted Functional Partners:
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.862
EDS75723.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: ctc:CTC02523 8.9e-108 ywdH; putative aldehyde dehydrogenase YwdH K00128; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.854
EDS74221.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS74223.1
4Fe-4S binding domain protein; KEGG: mka:MK0930 1.7e-05 coenzyme F420-reducing hydrogenase, gamma subunit K00439; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS74224.1
COG: COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.773
pdxB-2
KEGG: cff:CFF8240_1663 1.6e-67 hprA; glycerate dehydrogenase K00018; COG: COG1052 Lactate dehydrogenase and related dehydrogenases; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.717
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.684
EDS75482.1
Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 1.6e-23 ribonuclease UK114; COG: COG0251 Putative translation initiation inhibitor, yjgF family.
 
    0.682
EDS75131.1
Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; KEGG: cpe:CPE0393 5.2e-80 3-hydroxyisobutyrate dehydrogenase K00020; COG: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.653
EDS74225.1
COG: COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.634
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.