STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74233.1Capsular exopolysaccharide family; KEGG: bcl:ABC3815 5.3e-39 tyrosine-protein kinase K00903; COG: COG0489 ATPases involved in chromosome partitioning; Psort location: CytoplasmicMembrane, score: 9.82. (242 aa)    
Predicted Functional Partners:
EDS74235.1
Chain length determinant protein; KEGG: nca:Noca_4185 3.0e-14 lipopolysaccharide biosynthesis; COG: COG3944 Capsular polysaccharide biosynthesis protein.
 
 0.998
EDS74234.1
PHP domain protein; KEGG: cno:NT01CX_1524 2.1e-28 CpsB protein K01104; COG: COG4464 Capsular polysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.966
EDS73944.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: eca:ECA1420 1.9e-50 rfbP, asmG; undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.946
EDS74972.1
PHP domain protein; KEGG: btl:BALH_4780 3.7e-31 epsC; capsular polysaccharide biosynthesis protein K01104; COG: COG4464 Capsular polysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.857
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.855
EDS74232.1
Hypothetical protein.
       0.773
EDS74445.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 7.2e-225 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
    
 0.692
EDS74453.1
Respiratory-chain NADH dehydrogenase 24 Kd subunit; KEGG: bth:BT0123 3.1e-34 NADH-ubiquinone oxidoreductase subunit K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score: 9.98.
     
 0.688
EDS74973.1
Chain length determinant protein; KEGG: chu:CHU_0880 6.0e-28 wzc; tyrosine-protein kinase K08252; COG: COG3944 Capsular polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
0.665
EDS74974.1
Chain length determinant protein; KEGG: ava:Ava_1045 1.3e-29 lipopolysaccharide biosynthesis K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
0.661
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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