STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74235.1Chain length determinant protein; KEGG: nca:Noca_4185 3.0e-14 lipopolysaccharide biosynthesis; COG: COG3944 Capsular polysaccharide biosynthesis protein. (238 aa)    
Predicted Functional Partners:
EDS74233.1
Capsular exopolysaccharide family; KEGG: bcl:ABC3815 5.3e-39 tyrosine-protein kinase K00903; COG: COG0489 ATPases involved in chromosome partitioning; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.998
EDS74234.1
PHP domain protein; KEGG: cno:NT01CX_1524 2.1e-28 CpsB protein K01104; COG: COG4464 Capsular polysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.977
EDS74972.1
PHP domain protein; KEGG: btl:BALH_4780 3.7e-31 epsC; capsular polysaccharide biosynthesis protein K01104; COG: COG4464 Capsular polysaccharide biosynthesis protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.905
EDS74973.1
Chain length determinant protein; KEGG: chu:CHU_0880 6.0e-28 wzc; tyrosine-protein kinase K08252; COG: COG3944 Capsular polysaccharide biosynthesis protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.893
EDS74974.1
Chain length determinant protein; KEGG: ava:Ava_1045 1.3e-29 lipopolysaccharide biosynthesis K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.893
EDS74232.1
Hypothetical protein.
       0.773
EDS73944.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: eca:ECA1420 1.9e-50 rfbP, asmG; undecaprenyl-phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.710
EDS74230.1
COG: COG3764 Sortase (surface protein transpeptidase).
 
   
 0.673
EDS74229.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.584
EDS74236.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 7.1e-170 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.577
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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