STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS74242.1KEGG: pen:PSEEN3042 3.2e-67 macB; macrolide ABC efflux protein MacB; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00. (893 aa)    
Predicted Functional Partners:
EDS73805.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.905
EDS75247.1
KEGG: spr:spr0622 2.1e-28 glnQ; ABC transporter ATP-binding protein - glutamine transport K02028; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
0.889
EDS75779.1
COG: COG2834 Outer membrane lipoprotein-sorting protein.
   
 
 0.868
EDS75248.1
KEGG: lwe:lwe2133 1.3e-31 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.867
EDS75506.1
Efflux ABC transporter, permease protein; KEGG: cal:orf19.2410 6.5e-06 IMH1; involved in vesicular transport K01553; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.728
EDS74243.1
Bacterial transferase hexapeptide repeat protein; KEGG: spy:SPy1065 5.8e-65 putative acetyltransferase K00680; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 9.65.
       0.701
EDS74483.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 8.2e-66 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase.
 
 
 0.602
EDS75341.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
 
 0.601
EDS74006.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 2.3e-68 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase.
 
 
 0.583
EDS75979.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 7.6e-79 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.580
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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