STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74245.1Hypothetical protein; COG: NOG18028 non supervised orthologous group. (92 aa)    
Predicted Functional Partners:
EDS74246.1
Hypothetical protein; KEGG: reu:Reut_B4409 6.3e-27 catalase K07217; COG: COG3546 Mn-containing catalase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.965
EDS74244.1
Hypothetical protein.
       0.773
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
   
    0.463
EDS74606.1
Putative spore coat protein GerQ; COG: NOG14257 non supervised orthologous group.
   
  
 0.451
EDS73950.1
KEGG: bce:BC0896 1.3e-31 S-layer protein / peptidoglycan endo-beta-N-acetylglucosaminidase K01238; COG: COG5263 FOG: Glucan-binding domain (YG repeat); Psort location: Extracellular, score: 9.04.
  
     0.450
cotE
Spore coat protein E; COG: NOG09743 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
   
  
 0.428
EDS74243.1
Bacterial transferase hexapeptide repeat protein; KEGG: spy:SPy1065 5.8e-65 putative acetyltransferase K00680; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 9.65.
  
    0.407
EDS74656.1
Hypothetical protein; COG: NOG16845 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.403
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.