STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74322.1Putative sporulation integral membrane protein YtvI; KEGG: tbd:Tbd_2668 2.5e-08 phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthetase K01923; COG: COG0628 Predicted permease; Psort location: CytoplasmicMembrane, score: 9.99. (338 aa)    
Predicted Functional Partners:
EDS74323.1
Acetyltransferase, GNAT family; KEGG: bha:BH0585 1.6e-14 ribosomal-protein (S5)-alanine N-acetyltransferase K03790; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS74321.1
Polysaccharide deacetylase; KEGG: ctc:CTC00537 1.8e-29 peptidoglycan N-acetylglucosamine deacetylase K01463; COG: COG0726 Predicted xylanase/chitin deacetylase.
  
    0.618
EDS74320.1
Hypothetical protein; COG: NOG26052 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.418
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.