STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74324.1YbaK/proline--tRNA ligase associated domain protein; KEGG: pfa:PFL0670c 5.4e-14 Bi-functional aminoacyl-tRNA synthetase, putative K01881:K01885; COG: COG3760 Uncharacterized conserved protein. (163 aa)    
Predicted Functional Partners:
EDS74220.1
HAD hydrolase, family IA, variant 1; KEGG: tte:TTE2216 6.8e-23 gph; predicted phosphatase K06019; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
 
 
    0.679
EDS74325.1
Response regulator receiver domain protein; KEGG: aci:ACIAD0627 3.5e-26 baeR; transcriptional regulator protein (OmpR family),response regulator in two-component regulatory system with BaeS, regulates RNA synthesis K07664; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.532
EDS74326.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cac:CAC0225 1.3e-37 sensory transduction histidine kinase; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
       0.532
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.