STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74345.1HpcH/HpaI aldolase/citrate lyase family protein; KEGG: sto:ST1786 0.0018 citrate lyase beta chain K01644; Psort location: Cytoplasmic, score: 8.87; Belongs to the HpcH/HpaI aldolase family. (290 aa)    
Predicted Functional Partners:
EDS74342.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 8.4e-167 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; COG: COG1086 Predicted nucleoside-diphosphate sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
     0.807
EDS74344.1
Bacterial sugar transferase; KEGG: cpe:CPE0614 9.9e-38 rfbP; probable undecaprenyl phosphate galactosephosphotransferase K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.49.
  
    0.790
EDS74343.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: cgb:cg0439 4.8e-13 putative acetyl transferase protein K00680; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 8.87.
  
  
 0.781
EDS74346.1
Glycosyltransferase, group 1 family protein; KEGG: cgb:cg0420 3.3e-30 glycosyl transferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
    0.777
EDS74348.1
Hypothetical protein; COG: NOG21681 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.777
EDS74347.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1387 1.4e-31 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.775
EDS75131.1
Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; KEGG: cpe:CPE0393 5.2e-80 3-hydroxyisobutyrate dehydrogenase K00020; COG: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.683
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
  0.613
EDS74629.1
Alcohol dehydrogenase, iron-dependent; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.603
EDS75723.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: ctc:CTC02523 8.9e-108 ywdH; putative aldehyde dehydrogenase YwdH K00128; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.495
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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