STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74352.1Glycosyltransferase, group 1 family protein; KEGG: ava:Ava_1041 5.3e-23 glycosyl transferase, group 1 K00703; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87. (403 aa)    
Predicted Functional Partners:
EDS74358.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 6.5e-73 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
 0.852
EDS74353.1
Hypothetical protein; KEGG: sha:SH0994 0.0026 agrC; AgrC K07706; COG: NOG17531 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.783
EDS74354.1
Glycosyltransferase, group 1 family protein; KEGG: aae:aq_516 2.2e-10 mtfC; mannosyltransferase C K00743; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
     0.721
comC
KEGG: pho:PH1277 7.9e-52 malate dehydrogenase K00025; COG: COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.714
EDS74356.1
Hypothetical protein; COG: NOG06398 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.703
EDS74355.1
4Fe-4S binding domain protein; KEGG: mth:MTH341 1.8e-13 coenzyme F420-reducing hydrogenase, beta subunit homolog K00439; COG: COG1035 Coenzyme F420-reducing hydrogenase, beta subunit.
       0.668
EDS74359.1
KEGG: spn:SP_0360 3.9e-178 UDP-N-acetylglucosamine 2-epimerase K01791; COG: COG0381 UDP-N-acetylglucosamine 2-epimerase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.665
EDS75171.1
Hypothetical protein; KEGG: vfi:VF0192 0.00030 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
 0.660
EDS75176.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 4.6e-72 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.647
cps4K
Capsular polysaccharide biosynthesis protein Cps4K; KEGG: vfi:VF0192 2.6e-60 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.641
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.