Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDS74376.1Acetyltransferase, GNAT family; KEGG: aae:aq_567 1.7e-08 rimI; ribosomal-protein-alanine acetyltransferase K03789; COG: NOG17857 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (174 aa)    
Predicted Functional Partners:
EDS75124.1
Acetyltransferase, GNAT family; KEGG: bce:BC3479 1.9e-27 acetyltransferase K00680; COG: COG3153 Predicted acetyltransferase.
    
 0.679
EDS74377.1
Hypothetical protein.
       0.655
tnpX
TnpX site-specific recombinase; KEGG: mmu:330177 0.0073 Taok3; TAO kinase 3 K04429; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
       0.655
rpiA
KEGG: cac:CAC1431 6.2e-52 rpiA; ribose 5-phosphate isomerase K01807; COG: COG0120 Ribose 5-phosphate isomerase; Psort location: Cytoplasmic, score: 8.87.
  
    0.590
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
  
    0.466
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
       0.442
EDS74382.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
       0.442
EDS74375.1
Hypothetical protein.
       0.415
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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