STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnpXTnpX site-specific recombinase; KEGG: mmu:330177 0.0073 Taok3; TAO kinase 3 K04429; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87. (546 aa)    
Predicted Functional Partners:
EDS74377.1
Hypothetical protein.
       0.773
EDS74376.1
Acetyltransferase, GNAT family; KEGG: aae:aq_567 1.7e-08 rimI; ribosomal-protein-alanine acetyltransferase K03789; COG: NOG17857 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.655
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.519
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
       0.512
EDS74382.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
       0.512
EDS75700.1
DNA-binding helix-turn-helix protein; KEGG: sco:SCO5998 0.00038 murA2, SCBAC1C11.01c, StBAC16H6.33c; putative UDP-N-acetylglucosamine transferase K00790; COG: COG1396 Predicted transcriptional regulators.
 
   
 0.486
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
   0.447
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
   0.415
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.