STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74405.1YhgE/Pip domain protein; KEGG: pfa:MAL8P1.23 1.3e-09 ubiquitin-protein ligase 1, putative; COG: COG1511 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (812 aa)    
Predicted Functional Partners:
EDS74406.1
Transcriptional regulator, Rrf2 family; COG: COG1959 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
    0.666
EDS75341.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
 
 
   0.638
EDS74415.1
Putative type VII secretion protein EssB; KEGG: mhj:MHJ_0623 3.0e-05 dam; DNA adenine methylase K06223; COG: COG4499 Predicted membrane protein.
 
  
 0.520
EDS74133.1
COG: COG4476 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
     0.515
EDS74913.1
Peptidase M16 inactive domain protein; KEGG: bcz:BCZK3546 1.1e-104 insulysin, peptidase family M16 (insulinase) K01408; COG: COG0612 Predicted Zn-dependent peptidases; Psort location: Cytoplasmic, score: 8.87.
  
 
   0.493
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.