STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74406.1Transcriptional regulator, Rrf2 family; COG: COG1959 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87. (147 aa)    
Predicted Functional Partners:
EDS75128.1
Aminotransferase, class V; KEGG: oih:OB2199 9.8e-86 L-cysteine sulfurtransferase (iron-sulfur cofactor synthesis) K04487; COG: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.752
EDS74405.1
YhgE/Pip domain protein; KEGG: pfa:MAL8P1.23 1.3e-09 ubiquitin-protein ligase 1, putative; COG: COG1511 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    0.666
EDS74408.1
Hypothetical protein; KEGG: ctc:CTC02272 5.5e-28 purine nucleoside phosphorylase K00755; COG: COG1683 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.610
EDS74407.1
KEGG: bfs:BF0801 1.6e-39 putative phosphoglycolate phosphatase K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.602
EDS75346.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 4.5e-136 NADH dehydrogenase K00359; COG: COG0607 Rhodanese-related sulfurtransferase; Psort location: Cytoplasmic, score: 9.65; Belongs to the sulfur carrier protein TusA family.
  
  
 0.527
EDS75341.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.523
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.503
EDS74965.1
Rubredoxin; KEGG: syn:sll0550 3.3e-46 flavoprotein; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score: 8.87.
     
 0.496
EDS74410.1
Glyoxalase family protein; KEGG: bth:BT1580 1.0e-42 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases; Psort location: Cytoplasmic, score: 8.87.
     
 0.456
EDS74409.1
KEGG: cac:CAC0566 1.3e-97 malate dehydrogenase K00025; COG: COG2055 Malate/L-lactate dehydrogenases; Psort location: Cytoplasmic, score: 8.87; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.454
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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