STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74409.1KEGG: cac:CAC0566 1.3e-97 malate dehydrogenase K00025; COG: COG2055 Malate/L-lactate dehydrogenases; Psort location: Cytoplasmic, score: 8.87; Belongs to the LDH2/MDH2 oxidoreductase family. (373 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
     
 0.867
EDS74410.1
Glyoxalase family protein; KEGG: bth:BT1580 1.0e-42 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases; Psort location: Cytoplasmic, score: 8.87.
       0.752
EDS74407.1
KEGG: bfs:BF0801 1.6e-39 putative phosphoglycolate phosphatase K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.572
EDS74408.1
Hypothetical protein; KEGG: ctc:CTC02272 5.5e-28 purine nucleoside phosphorylase K00755; COG: COG1683 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.572
ilvE
Branched-chain-amino-acid transaminase; KEGG: bha:BH2156 1.6e-110 bcaT; branched-chain amino acid aminotransferase K00826; COG: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Psort location: Cytoplasmic, score: 8.87.
   
  0.492
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
    
 0.491
EDS74205.1
Hypothetical protein; KEGG: lla:L0022 0.0026 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase K01625:K01650; COG: NOG09943 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
     
 0.464
EDS75226.1
Cupin domain protein; KEGG: pab:PAB0818 0.0061 manC; mannose-1-phosphate guanylyltransferase K00971; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
    
 0.463
EDS74406.1
Transcriptional regulator, Rrf2 family; COG: COG1959 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
       0.454
EDS74574.1
FAD dependent oxidoreductase; KEGG: mma:MM1656 1.6e-55 oxidoreductase K00100; COG: COG0665 Glycine/D-amino acid oxidases (deaminating); Psort location: Cytoplasmic, score: 8.87.
    
 0.448
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.