STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74411.1Hypothetical protein; KEGG: mmy:MSC_0837 6.6e-08 pldB; lysophospholipase K01048; COG: COG2267 Lysophospholipase. (106 aa)    
Predicted Functional Partners:
EDS74445.1
4Fe-4S binding domain protein; KEGG: tte:TTE0893 7.2e-225 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335; COG: COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.803
EDS74453.1
Respiratory-chain NADH dehydrogenase 24 Kd subunit; KEGG: bth:BT0123 3.1e-34 NADH-ubiquinone oxidoreductase subunit K00334; COG: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; Psort location: Cytoplasmic, score: 9.98.
   
   0.783
EDS74277.1
Hypothetical protein; KEGG: ctc:CTC00812 5.1e-41 putative lysophospholipase L2 K01048; COG: COG2267 Lysophospholipase; Psort location: Cytoplasmic, score: 8.87.
  
     0.742
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
   0.723
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.697
EDS75592.1
Hypothetical protein; KEGG: mmy:MSC_0837 1.2e-39 pldB; lysophospholipase K01048; COG: COG2267 Lysophospholipase; Psort location: Cytoplasmic, score: 8.87.
  
     0.678
EDS75900.1
Hypothetical protein; COG: NOG31153 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
    
   0.471
EDS74410.1
Glyoxalase family protein; KEGG: bth:BT1580 1.0e-42 lactoylglutathione lyase K01759; COG: COG0346 Lactoylglutathione lyase and related lyases; Psort location: Cytoplasmic, score: 8.87.
  
    0.458
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
   0.433
EDS74409.1
KEGG: cac:CAC0566 1.3e-97 malate dehydrogenase K00025; COG: COG2055 Malate/L-lactate dehydrogenases; Psort location: Cytoplasmic, score: 8.87; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.430
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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