STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74417.1Transposase, Mutator family; Required for the transposition of the insertion element. (398 aa)    
Predicted Functional Partners:
EDS74416.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.578
EDS74413.1
Putative type VII secretion protein EssA; KEGG: pfa:PFD0420c 0.0027 flap exonuclease, putative K04799; Psort location: CytoplasmicMembrane, score: 9.87.
       0.562
EDS74414.1
Hypothetical protein.
       0.562
EDS74415.1
Putative type VII secretion protein EssB; KEGG: mhj:MHJ_0623 3.0e-05 dam; DNA adenine methylase K06223; COG: COG4499 Predicted membrane protein.
       0.562
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.