STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74428.1Hypothetical protein; KEGG: rfe:RF_0460 0.0018 nuoN2; NADH dehydrogenase subunit N K00329; COG: NOG18662 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (264 aa)    
Predicted Functional Partners:
EDS75082.1
COG: COG5401 Spore germination protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.646
EDS74179.1
Ser/Thr phosphatase family protein; KEGG: hso:HS_0581 2.1e-07 icc; 3',5'-cyclic-nucleotide phosphodiesterase K03651; COG: COG1409 Predicted phosphohydrolases.
 
     0.641
EDS75610.1
Putative flagellar protein FliS; KEGG: fnu:FN0522 0.0010 exonuclease SBCC K03546; COG: NOG11397 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.629
EDS74808.1
Hypothetical protein; KEGG: saa:SAUSA300_0964 0.00026 chitinase-related protein K01183; COG: COG1426 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
     0.573
spoVAC
Stage V sporulation protein AC; COG: NOG09745 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26.
       0.570
spoVAD
Stage V sporulation protein AD; COG: NOG06312 non supervised orthologous group.
       0.570
EDS74431.1
Putative stage V sporulation protein AE; COG: NOG13202 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
       0.570
EDS74432.1
Hypothetical protein; COG: NOG05963 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.80.
       0.570
EDS75754.1
Hypothetical protein; KEGG: ctc:CTC02329 7.7e-10 putative V-type sodium ATP synthase subunit E K02121; COG: NOG31657 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.533
folC-2
Bifunctional protein FolC; KEGG: lmo:lmo1551 1.3e-60 folC; folylpolyglutamate synthase K01930; COG: COG0285 Folylpolyglutamate synthase; Psort location: Cytoplasmic, score: 8.87.
 
     0.531
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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