STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74442.1Hypothetical protein; KEGG: tfu:Tfu_0883 0.0038 triacylglycerol lipase K01046; COG: NOG21166 non supervised orthologous group. (310 aa)    
Predicted Functional Partners:
EDS74441.1
Hypothetical protein; KEGG: ctc:CTC01505 3.5e-09 lipase K01046; COG: COG0657 Esterase/lipase.
 
     0.818
EDS74440.1
Hypothetical protein.
       0.768
EDS74439.1
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator.
       0.515
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.