STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS74487.1KEGG: bcz:BCZK3833 4.2e-14 transcriptional regulator, GntR family; COG: COG1725 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87. (124 aa)    
Predicted Functional Partners:
EDS74486.1
KEGG: hpa:HPAG1_1162 5.5e-28 ABC transporter, ATP-binding protein K06022; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.954
EDS74485.1
Hypothetical protein; KEGG: efa:EF1519 0.0030 cation-transporting ATPase, E1-E2 family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.774
EDS74657.1
KEGG: afu:AF1021 2.4e-27 ABC transporter, ATP-binding protein K02017; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.714
EDS74484.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 5.4e-30 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.65.
  
    0.564
EDS74483.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_0116 8.2e-66 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase.
       0.554
EDS74488.1
SH3 domain protein; KEGG: lwe:lwe1534 0.00025 N-acetylmuramoyl-L-alanine amidase K01446; COG: COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.87.
       0.514
EDS74126.1
Transcriptional regulator, GntR family; KEGG: bcz:pE33L466_0090 5.9e-56 aminotransferase, MocR-like; COG: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.442
EDS74481.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.416
EDS74482.1
KEGG: lwe:lwe2133 5.8e-72 ABC transporter, ATP-binding protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
    0.411
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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