STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73679.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (136 aa)    
Predicted Functional Partners:
EDS73678.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 2.1e-05 yhdM; Zn(II)-responsive regulator of ZntA; COG: COG4978 Transcriptional regulator, effector-binding domain/component; Psort location: Cytoplasmic, score: 8.87.
       0.592
EDS73680.1
Sigma-70, region 4; COG: NOG16920 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.492
EDS73681.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.492
EDS73677.1
Acetyltransferase, GNAT family.
       0.445
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.