STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagJ-3O-GlcNAcase NagJ; KEGG: cpe:CPE0191 8.2e-97 nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Extracellular, score: 9.73. (1363 aa)    
Predicted Functional Partners:
EDS75491.1
Hypothetical protein; KEGG: sha:SH0521 2.0e-10 ptsG; phosphotransferase system enzyme II K02777:K02778:K02779; COG: COG2190 Phosphotransferase system IIA components.
  
  
 0.970
EDS73779.1
KEGG: sar:SAR0235 1.9e-137 putative PTS transport system, IIBC component K02790:K02791; COG: COG1264 Phosphotransferase system IIB components; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.970
nagJ-2
O-GlcNAcase NagJ; KEGG: cpe:CPE0191 1.1e-58 nagH; hyaluronoglucosaminidase K01197; COG: NOG11197 non supervised orthologous group; Psort location: Extracellular, score: 8.10.
 
 
 
0.921
EDS75646.1
Hypothetical protein; KEGG: cpr:CPR_0949 9.9e-09 chitinase B K01183; COG: COG3469 Chitinase.
    
 0.792
nagE
KEGG: sgl:SG0859 6.9e-140 PTS system N-acetylglucosamine-specific IIABC component K02802:K02803:K02804; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.780
EDS73694.1
Glycosyl hydrolase family 20, catalytic domain protein; KEGG: cpe:CPE1364 2.8e-27 beta-N-acetylhexosaminidase K01207; COG: COG3525 N-acetyl-beta-hexosaminidase; Psort location: Extracellular, score: 9.73.
 
    
0.678
EDS74121.1
F5/8 type C domain protein; KEGG: spr:spr1536 1.2e-99 nanA; sialidase A precursor (neuraminidase A) K01186; COG: COG4409 Neuraminidase (sialidase); Psort location: Cellwall, score: 9.17.
 
 
0.580
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.505
EDS74317.1
Hypothetical protein; COG: NOG23360 non supervised orthologous group.
  
  
  0.470
EDS74056.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 0. lacZ; beta-galactosidase K01190; COG: COG3250 Beta-galactosidase/beta-glucuronidase; Psort location: Extracellular, score: 8.07; Belongs to the glycosyl hydrolase 2 family.
 
0.454
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.