STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73701.1F5/8 type C domain protein; KEGG: cpe:CPE1364 2.6e-08 beta-N-acetylhexosaminidase K01207; COG: NOG08372 non supervised orthologous group. (598 aa)    
Predicted Functional Partners:
sufS
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.797
EDS73703.1
Polysaccharide lyase family 8, super-sandwich domain protein; KEGG: bcz:pE33L466_0352 7.1e-99 xalA; hyaluronate lyase; COG: NOG08372 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
     0.761
EDS73702.1
COG: COG5492 Bacterial surface proteins containing Ig-like domains; Psort location: Cytoplasmic, score: 8.87.
       0.723
EDS75799.1
Putative alpha-1,2-mannosidase; KEGG: cpf:CPF_0184 3.7e-14 nagH; hyaluronidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98.
  
     0.611
EDS75974.1
Hypothetical protein; KEGG: cpe:CPE1876 2.3e-61 alpha-L-fucosidase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
    0.609
EDS73904.1
Glycosyl hydrolase, family 88; COG: COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
  
     0.582
EDS75813.1
Putative alpha-1,2-mannosidase; KEGG: cpe:CPE0191 4.7e-10 nagH; hyaluronoglucosaminidase K01197; COG: COG1404 Subtilisin-like serine proteases; Psort location: Extracellular, score: 9.73.
  
     0.577
EDS75973.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE1364 9.7e-17 beta-N-acetylhexosaminidase K01207; COG: NOG04032 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
 
     0.577
EDS75808.1
Putative alpha-1,2-mannosidase; KEGG: cpe:CPE0191 3.4e-08 nagH; hyaluronoglucosaminidase K01197; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.98.
  
     0.558
EDS75810.1
Putative alpha-1,2-mannosidase; KEGG: bfr:BF0339 2.8e-16 alpha-mannosidase K01191; COG: COG3537 Putative alpha-1,2-mannosidase; Psort location: Extracellular, score: 9.73.
  
     0.487
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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