STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73702.1COG: COG5492 Bacterial surface proteins containing Ig-like domains; Psort location: Cytoplasmic, score: 8.87. (165 aa)    
Predicted Functional Partners:
EDS73701.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 2.6e-08 beta-N-acetylhexosaminidase K01207; COG: NOG08372 non supervised orthologous group.
       0.723
EDS73703.1
Polysaccharide lyase family 8, super-sandwich domain protein; KEGG: bcz:pE33L466_0352 7.1e-99 xalA; hyaluronate lyase; COG: NOG08372 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
       0.506
EDS75576.1
Hypothetical protein; COG: NOG16848 non supervised orthologous group.
  
     0.407
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.