STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73753.1M42 glutamyl aminopeptidase; KEGG: fnu:FN0999 3.9e-66 deblocking aminopeptidase K01269; COG: COG1363 Cellulase M and related proteins; Psort location: Cytoplasmic, score: 8.87. (346 aa)    
Predicted Functional Partners:
EDS73754.1
KEGG: reh:H16_B0716 3.6e-88 dppF3; ABC-type transporter, ATPase component: PepT family; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.718
EDS73755.1
KEGG: cch:Cag_1883 2.4e-91 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.718
EDS73756.1
KEGG: rha:RHA1_ro09047 8.5e-06 ABC peptide transporter, permease component K02033; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.709
EDS73757.1
KEGG: rha:RHA1_ro09047 1.6e-46 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.709
EDS73758.1
ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 1.7e-28 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Cellwall, score: 9.18.
       0.631
EDS73751.1
Putative isocitrate dehydrogenase, NAD-dependent; KEGG: cac:CAC0972 2.9e-93 citC; isocitrate dehydrogenase K00030; COG: COG0473 Isocitrate/isopropylmalate dehydrogenase; Psort location: Cytoplasmic, score: 9.98.
  
    0.519
EDS73752.1
KEGG: cno:NT01CX_0140 1.6e-202 aconitate hydratase K01680; COG: COG1048 Aconitase A; Psort location: Cytoplasmic, score: 8.87.
  
    0.463
EDS73759.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.452
EDS73750.1
FCD domain protein; KEGG: msm:MSMEG_3400 5.2e-14 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; COG: COG1802 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
       0.449
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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