STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73765.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
EDS73766.1
Toxin secretion/phage lysis holin; KEGG: chu:CHU_0880 0.0076 wzc; tyrosine-protein kinase K08252; COG: COG4824 Phage-related holin (Lysis protein); Psort location: CytoplasmicMembrane, score: 9.26.
       0.773
EDS73767.1
Putative transposase; COG: NOG06168 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.524
EDS73768.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.514
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.