STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73772.1KEGG: tbr:Tb927.7.5790 0.0013 protein disulfide isomerase K01829; Psort location: Cytoplasmic, score: 8.87. (97 aa)    
Predicted Functional Partners:
EDS73773.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.799
EDS73774.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.773
rlmH
rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.762
EDS73776.1
Metallo-beta-lactamase domain protein; KEGG: fnu:FN0900 1.9e-25 metal dependent hydrolase; COG: COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
       0.762
EDS75346.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: bce:BC0791 4.5e-136 NADH dehydrogenase K00359; COG: COG0607 Rhodanese-related sulfurtransferase; Psort location: Cytoplasmic, score: 9.65; Belongs to the sulfur carrier protein TusA family.
  
  
 0.655
EDS74090.1
Hypothetical protein; KEGG: ftl:FTL_0636 3.2e-09 NADH oxidase K00359; COG: COG0607 Rhodanese-related sulfurtransferase.
  
  
 0.635
EDS75314.1
Copper-exporting ATPase; KEGG: cpf:CPF_0534 2.0e-185 copper-translocating P-type ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.629
EDS74806.1
Putative thioredoxin-disulfide reductase; KEGG: cpe:CPE0783 1.3e-122 probable thioredoxin reductase K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.65.
  
 
 0.627
EDS73770.1
Phosphodiesterase family protein; KEGG: eci:UTI89_C2584 3.5e-42 yfcE; hypothetical protein; COG: COG0622 Predicted phosphoesterase; Psort location: Cytoplasmic, score: 8.87.
 
    0.604
EDS74965.1
Rubredoxin; KEGG: syn:sll0550 3.3e-46 flavoprotein; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score: 8.87.
     
 0.574
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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