STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS73789.1Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: tma:TM0025 3.1e-65 beta-glucosidase K05349; COG: COG1472 Beta-glucosidase-related glycosidases; Psort location: Extracellular, score: 9.55. (1031 aa)    
Predicted Functional Partners:
EDS73790.1
Hypothetical protein; KEGG: tma:TM0025 1.8e-10 beta-glucosidase K05349; COG: COG1472 Beta-glucosidase-related glycosidases.
     0.990
EDS73788.1
Transcriptional regulator, AraC family; KEGG: bsu:BG10166 1.7e-13 adaA; methylphosphotriester-DNA alkyltransferase / transcriptional regulator (AraC family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.65.
       0.459
EDS74579.1
LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family.
  
     0.429
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.