Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDS73790.1Hypothetical protein; KEGG: tma:TM0025 1.8e-10 beta-glucosidase K05349; COG: COG1472 Beta-glucosidase-related glycosidases. (114 aa)    
Predicted Functional Partners:
EDS73789.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: tma:TM0025 3.1e-65 beta-glucosidase K05349; COG: COG1472 Beta-glucosidase-related glycosidases; Psort location: Extracellular, score: 9.55.
     0.990
EDS75301.1
COG: COG4932 Predicted outer membrane protein; Psort location: Cellwall, score: 9.94.
  
     0.533
EDS73786.1
LPXTG-motif cell wall anchor domain protein; KEGG: cpe:CPE0191 5.5e-07 nagH; hyaluronoglucosaminidase K01197; COG: COG4099 Predicted peptidase.
 
     0.445
EDS74579.1
LytTr DNA-binding domain protein; COG: COG3279 Response regulator of the LytR/AlgR family.
  
     0.440
EDS74147.1
LPXTG-motif cell wall anchor domain protein; KEGG: aba:Acid345_0898 1.5e-68 alpha-glucosidase K01187; COG: COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Psort location: Extracellular, score: 9.73.
 
  
 0.405
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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